Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809230.1_cds_XP_016495660.1_9956
CDS Infomation

[gene=LOC107814724] [db_xref=GeneID:107814724] [protein=conserved oligomeric Golgi complex subunit 6-like] [protein_id=XP_016495660.1] [location=join(25384..25593,25664..25716,25953..26100,26190..26297,27973..28040,28591..28714,28805..28951,29062..29322,29410..29694,31745..31891,32350..32874)] [gbkey=CDS]
Sequence

ATGGCATTGGCACCGGGGCTATCACGGAAGCTGAAGAAAGTGCTGGAAACTCGAACAGAC
ACGCCGGATCTGCTCGCATCTCTGAATACTCTCTCCACATTCTACACCGAAAACACACCT
CATTCTCGCCGTAACCTCCGATCCACTATTGAGAAGCGTTCTCTATCTATAAATGAAGAG
TTCCTTCTTTCCTCCACTGCTGCTCAGAAGGCGTTGGATCGAGTCGAAGAAGAAGTCAAT
TCGATCGTGGAATGCTGTGACAAAATTGCACTGGCTTTAAGCAGTTGCAATGCCACGACA
GGTGATATTATTAGTACCACAGAACGGCTGAAACAGGAATTTGAAATTACTACACAGAGG
CAAGAAATTGTATCATGCTTTCTTCGTGATTATCAGCTATCCCCAGAAGAGATAAATGCT
CTTAGGGAAGAAGACCTGGATGAGAATTTTTTTAAGGCGCTGGCTCATGTTCAAGAAATT
CATGCCAACTGCAAAGTGCTTCTCAGGACACACCACCAACGCGCTGGTTTGGAGCTCATG
GATATGATGGCCATGTATCAAGAAGGAGCATATGAACGCCTTTGCAGGTGGGTTCAGACA
GAGTGTAGGAGACTTGGTGATGTTGATAACCCTGAAGTCGGAGAACTTCTGAAAACAGCA
GTCAGGTGTCTCAAAGAAAGACCAGTACTTTTTAAATATTGTGCGGAAGAGGTGGCAAAC
ATGAGGCACAATGCGTTGTTTAGGAGATTTATAAGTGCTCTTACACGTGGAGGACCTGGT
GGACTTCCCAGGCCAATTGAAGTGCATGCTCACGATCCTTTAAGATACGTCGGTGACATG
CTGGGATGGTTGCATCAGGCATTGGCGTCTGAAAGAGAGCTTGTCCTTGCATTGCTTGAC
CCTGATGCATCAGATACTAGATCAACTAGTCATAAATACCCCAAAGGCGTAGATAGTGAG
TATGGAAAGACAGAAACCGACTTGACTTTTGTTCTAGACAGGATTTTTGAAGGAGTTTGC
CGCCCTTTTAAAGTTAGAGTGGAACAAGTTTTGCACTCTCAACCTAATCTTATAATTTCT
TACAAGCTTAGTAATACACTGGAGTTCTATTTATACACAATATCGGATTTGCTGGGGGAA
GAAACATCTCTATGTAATACCTTACTGGTGCTCAAGGACGCAGCCCAAAAAACATTTTTT
GACATACTAAAGAGTCGGGGCGAGAAGCTTTTGAGGTATCCTCCATTGGTCGCTGTTGAT
CTTTCTCCACCACCAGCTTTAAGGGAAGGAGTTTCACTGCTGCTTGAAATTATTCAAACA
CATGATAGCATGATGTTCCCTGCATCTGGAAAGAAGCCTGACTTTGATCCAGCTATATCT
GCTCTGCTAGATCCTATTATTCAGATGTGTGAGCAAGCAGCAGAGGCGCACAAGTCAAAA
GGTGCCATACACTCCTCAAGAAGGAATAGAATTACTTCTGATCCAAGTCAACACCGCAGG
TCATCTGTGGATGCTCTTTTGGATGGCAAAAGTTCAGCATCTTTACCACAGACCAGTGAA
ACTCCGGCCAAAATTTTCCTCATCAACTGCTTATGTGCCATCCAGCAACCACTTTTAGGA
CATGAAGTTGCAAGTGGCTATGTGAAGAAGCTCGGAATAATGATAGACAATCACATAAAT
GCTCTTGTGGAAAAAGAAGTGGATGCTATTCTAAGAAGATGTGGTTTATTGAATAAAATG
TCACACTTCCGCAAGTCATTAGAAATTAGTGAATCTGGTAACTCCATAGCTAGGCAAGGG
TTAGCAGAAGAAGAGGATACAGCTCCGGTGTCTGTTGCTGAGAGTTTGAAGGCTTTCTTT
GGGCTCATTTTGGGCAGTGAAACCGCCATTCCTGAATTTGAGCAGATGCAAGTTCCAAGA
TTGCGATCAGAAACTAGTGTTCAGGTAGCTAGGTCACTTGCTGAAGCCTACGAGCTTATT
TACAGGGCTATCATGGACCCTGAGAATGGCTACCCAGATCCAAAGTCACTGGCTAGACAT
CCACCTGATCAGATAAGAACAATTTTGGGAATTTGA

Peptide Sequence

PEP ID

XP_016495660.1
PEP Infomation

PREDICTED: conserved oligomeric Golgi complex subunit 6-like [Nicotiana tabacum]
Sequence

MALAPGLSRKLKKVLETRTDTPDLLASLNTLSTFYTENTPHSRRNLRSTIEKRSLSINEE
FLLSSTAAQKALDRVEEEVNSIVECCDKIALALSSCNATTGDIISTTERLKQEFEITTQR
QEIVSCFLRDYQLSPEEINALREEDLDENFFKALAHVQEIHANCKVLLRTHHQRAGLELM
DMMAMYQEGAYERLCRWVQTECRRLGDVDNPEVGELLKTAVRCLKERPVLFKYCAEEVAN
MRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLALLD
PDASDTRSTSHKYPKGVDSEYGKTETDLTFVLDRIFEGVCRPFKVRVEQVLHSQPNLIIS
YKLSNTLEFYLYTISDLLGEETSLCNTLLVLKDAAQKTFFDILKSRGEKLLRYPPLVAVD
LSPPPALREGVSLLLEIIQTHDSMMFPASGKKPDFDPAISALLDPIIQMCEQAAEAHKSK
GAIHSSRRNRITSDPSQHRRSSVDALLDGKSSASLPQTSETPAKIFLINCLCAIQQPLLG
HEVASGYVKKLGIMIDNHINALVEKEVDAILRRCGLLNKMSHFRKSLEISESGNSIARQG
LAEEEDTAPVSVAESLKAFFGLILGSETAIPEFEQMQVPRLRSETSVQVARSLAEAYELI
YRAIMDPENGYPDPKSLARHPPDQIRTILGI

Transcript Sequence

Gene sequence data has not been registered.